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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938274.1_cds_XP_016483228.1_74365
CDS Infomation

[gene=LOC107803949] [db_xref=GeneID:107803949] [protein=metacaspase-3-like] [protein_id=XP_016483228.1] [location=complement(join(54497..54556,54876..55034,55547..55667,55759..56089,57156..57615))] [gbkey=CDS]
Sequence

ATGGAAAGCAGAAGGCACAGCTGCAGGCAGTGTGGACTGCAGCTACCAGCTCCTACTGGA
GCAAAAGCCATTTACTGTCCGAGGTGCCAACGTTTCACACAATTCCAACCAAAAAATAAT
ATGCATGGTGCCCCCACAGTCAATGCCAACGGGCCGTACAGTAACAATATTAATGCAATG
AACACAGGGCTACCAGTTTATCCTGCCAAACCAAGGACAGTAACATCTGGATTTGGTTAT
GGAAATTATAGGCCAGAGTCCTTCCAGATCAGGTCACCACAGGTCATGCGACCTCAGCCT
CCCCCACCAGTGCATGGACGGAAGCGAGCAGTTCTATGTGGAGCTAACTACCGTGGGCAT
AACAAGAGTTTGAAAGGCAGCATCAATGACGTTTTAGCCATGAGATATCTTTTGGTCGAC
AAGTTAGGGTTCCCCAATGCATCAGTAATTGTTCTTACAGAGAATGAGAAAGATATATTT
AGACTCCCAACCAAAGCCAATATCAGAGCAGCCCTGCGTTGGCTTGTTCACAGTTGCCAA
CCTGGTGATTCACTGGTATTTCATTACTCTGGCCATGGCTCACGAGTACGTGACCTTGAC
GGAGATGAAGTTGATGGATACGATGAATCACTATGCCCTATTGACTACGAGACAGAAGGA
CGAATACTAGATGATGAGATCAATGAAACCATTATAAGGCCTCTACCTCGTGGTGCCACA
CTTCATGCTATAATTGACGCTTGCCATAGTGGAACTTTTCTAGATTTACAGTTCATGTGT
AGAATAAACAGGGGAGGAAGCTATATGTGGGAAGATCATCGCACTCCACACGGCACATAC
AAAGGTACGAGAGGGGGAATAGCAATATGTATCAGCGCCTGTGATGATCATCAGAGCTCT
GGAGATACCATTGCTTTCACAGGTTTTCCAACTGGTGCACTGACTTATAGTTTTGTGAAA
ACATTGGAGCAAGAGCCTAAATTGACTTATGGACGCATGCTTCTGTCAATGCACAAGAAG
ATACACGAGACACAAAAAAGAATAGGCCTGAATAGTAAAGATGTATCTCAGGAACCTCAA
CTATCTGCTTCTGAACGGTTTGATATCCACTCCAAGCTGCTCATTCTATAG

Peptide Sequence

PEP ID

XP_016483228.1
PEP Infomation

PREDICTED: metacaspase-3-like [Nicotiana tabacum]
Sequence

MESRRHSCRQCGLQLPAPTGAKAIYCPRCQRFTQFQPKNNMHGAPTVNANGPYSNNINAM
NTGLPVYPAKPRTVTSGFGYGNYRPESFQIRSPQVMRPQPPPPVHGRKRAVLCGANYRGH
NKSLKGSINDVLAMRYLLVDKLGFPNASVIVLTENEKDIFRLPTKANIRAALRWLVHSCQ
PGDSLVFHYSGHGSRVRDLDGDEVDGYDESLCPIDYETEGRILDDEINETIIRPLPRGAT
LHAIIDACHSGTFLDLQFMCRINRGGSYMWEDHRTPHGTYKGTRGGIAICISACDDHQSS
GDTIAFTGFPTGALTYSFVKTLEQEPKLTYGRMLLSMHKKIHETQKRIGLNSKDVSQEPQ
LSASERFDIHSKLLIL

Transcript Sequence

Gene sequence data has not been registered.